Index

_

__all__ (in module itkwidgets) (in module itkwidgets.viewer) __new__() (itkwidgets.cell_watcher.CellWatcher method) _callback() (itkwidgets.cell_watcher.CellWatcher method) _cell_watcher (in module itkwidgets.viewer) _codecs_registered (in module itkwidgets.viewer) _detect_render_type() (in module itkwidgets.integrations) _execute_next_request() (itkwidgets.cell_watcher.CellWatcher method)

_get_viewer_image() (in module itkwidgets.integrations) _get_viewer_point_set() (in module itkwidgets.integrations) _make_multiscale_store() (in module itkwidgets.integrations) _numcodec_config (in module itkwidgets.imjoy) _numcodec_encoder (in module itkwidgets.imjoy) _setup_queueing() (itkwidgets.viewer.Viewer method) _spatial_image_scale_factors() (in module itkwidgets.integrations) _task_cleanup() (itkwidgets.cell_watcher.CellWatcher method) _viewer_count (in module itkwidgets.viewer)

A

add_point_set() (itkwidgets.viewer.Viewer method) add_viewer() (itkwidgets.cell_watcher.CellWatcher method) (itkwidgets.cell_watcher.Viewers method)

all_getters_resolved (itkwidgets.cell_watcher.CellWatcher property)

B

background_tasks (in module itkwidgets.cell_watcher) BROWSER (in module itkwidgets.standalone_server)

build_config() (in module itkwidgets._initialization_params) build_init_data() (in module itkwidgets._initialization_params)

C

call_getter() (itkwidgets.viewer.Viewer method) capture_event() (itkwidgets.cell_watcher.CellWatcher method) capture_event_async() (itkwidgets.cell_watcher.CellWatcher method) CellWatcher (class in itkwidgets.cell_watcher) cli_entrypoint() (in module itkwidgets.standalone_server) COLAB (itkwidgets.integrations.environment.Env attribute) color_bounds (itkwidgets.viewer.Viewer property)

color_map (itkwidgets.viewer.Viewer property) color_range (itkwidgets.viewer.Viewer property) compare_images() (in module itkwidgets.viewer) (itkwidgets.viewer.Viewer method) create_screenshot() (itkwidgets.viewer.ViewerRPC method) create_task() (itkwidgets.cell_watcher.CellWatcher method) CroppingPlanes (in module itkwidgets._type_aliases)

D

data (itkwidgets.cell_watcher.Viewers property) DATA_OPTIONS (in module itkwidgets._initialization_params)

defer_for_data_render() (in module itkwidgets._initialization_params) deferred_methods() (in module itkwidgets._method_types)

E

encode_itkwasm_image() (in module itkwidgets.imjoy) encode_zarr_store() (in module itkwidgets.imjoy)

Env (class in itkwidgets.integrations.environment) ENVIRONMENT (in module itkwidgets.integrations.environment) execute_next_request() (itkwidgets.cell_watcher.CellWatcher method)

F

fetch_value() (itkwidgets.viewer.Viewer method) fetch_zarr_store() (in module itkwidgets.standalone_server)

find_env() (in module itkwidgets.integrations.environment) find_port() (in module itkwidgets.standalone_server) FIXEDIMAGE (itkwidgets.render_types.RenderType attribute)

G

Gaussian_Curve (in module itkwidgets._type_aliases) Gaussians (in module itkwidgets._type_aliases) GEOMETRY (itkwidgets.render_types.RenderType attribute) get_annotations_enabled() (itkwidgets.viewer.Viewer method) get_axes_enabled() (itkwidgets.viewer.Viewer method) get_background_color() (itkwidgets.viewer.Viewer method) get_cropping_planes() (itkwidgets.viewer.Viewer method) get_current_scale() (itkwidgets.viewer.Viewer method) get_image() (itkwidgets.viewer.Viewer method) get_image_blend_mode() (itkwidgets.viewer.Viewer method) get_image_color_map() (itkwidgets.viewer.Viewer method) get_image_color_range() (itkwidgets.viewer.Viewer method) get_image_color_range_bounds() (itkwidgets.viewer.Viewer method) get_image_component_visibility() (itkwidgets.viewer.Viewer method) get_image_gradient_opacity() (itkwidgets.viewer.Viewer method) get_image_gradient_opacity_scale() (itkwidgets.viewer.Viewer method) get_image_interpolation_enabled() (itkwidgets.viewer.Viewer method) get_image_piecewise_function_gaussians() (itkwidgets.viewer.Viewer method) get_image_shadow_enabled() (itkwidgets.viewer.Viewer method) get_image_volume_sample_distance() (itkwidgets.viewer.Viewer method) get_image_volume_scattering_blend() (itkwidgets.viewer.Viewer method)

get_label_image() (itkwidgets.viewer.Viewer method) get_label_image_blend() (itkwidgets.viewer.Viewer method) get_label_image_label_names() (itkwidgets.viewer.Viewer method) get_label_image_lookup_table() (itkwidgets.viewer.Viewer method) get_label_image_weights() (itkwidgets.viewer.Viewer method) get_layer_names() (itkwidgets.viewer.Viewer method) get_layer_visibility() (itkwidgets.viewer.Viewer method) get_loaded_image_names() (itkwidgets.viewer.Viewer method) get_rendering_view_container_style() (itkwidgets.viewer.Viewer method) get_roi_image() (itkwidgets.viewer.Viewer method) get_roi_multiscale() (itkwidgets.viewer.Viewer method) get_roi_region() (itkwidgets.viewer.Viewer method) get_roi_slice() (itkwidgets.viewer.Viewer method) get_rotate() (itkwidgets.viewer.Viewer method) get_ui_collapsed() (itkwidgets.viewer.Viewer method) get_units() (itkwidgets.viewer.Viewer method) get_view_mode() (itkwidgets.viewer.Viewer method) get_x_slice() (itkwidgets.viewer.Viewer method) get_y_slice() (itkwidgets.viewer.Viewer method) get_z_slice() (itkwidgets.viewer.Viewer method) gradient_opacity (itkwidgets.viewer.Viewer property) gradient_opacity_scale (itkwidgets.viewer.Viewer property)

H

has_viewer (itkwidgets.viewer.Viewer property) HAVE_ITK (in module itkwidgets.integrations.itk) HAVE_MONAI (in module itkwidgets.integrations.monai) HAVE_MULTISCALE_SPATIAL_IMAGE (in module itkwidgets.integrations.xarray)

HAVE_TORCH (in module itkwidgets.integrations.pytorch) HAVE_VTK (in module itkwidgets.integrations.vtk) HAVE_XARRAY (in module itkwidgets.integrations.xarray) HYPHA (itkwidgets.integrations.environment.Env attribute)

I

Image (in module itkwidgets._type_aliases) IMAGE (itkwidgets.render_types.RenderType attribute) init_params_dict() (in module itkwidgets._initialization_params) input_dict() (in module itkwidgets.standalone_server) INPUT_OPTIONS (in module itkwidgets._initialization_params) itk_viewer (itkwidgets.viewer.Viewer property) ITK_VIEWER_SRC (in module itkwidgets.viewer_config) itkwidgets module itkwidgets._initialization_params module itkwidgets._method_types module itkwidgets._type_aliases module itkwidgets.cell_watcher module itkwidgets.imjoy module itkwidgets.integrations module itkwidgets.integrations.environment module itkwidgets.integrations.imageio module itkwidgets.integrations.itk module itkwidgets.integrations.meshio module itkwidgets.integrations.monai module

itkwidgets.integrations.numpy module itkwidgets.integrations.pyimagej module itkwidgets.integrations.pytorch module itkwidgets.integrations.pyvista module itkwidgets.integrations.skan module itkwidgets.integrations.vedo module itkwidgets.integrations.vtk module itkwidgets.integrations.xarray module itkwidgets.integrations.zarr module itkwidgets.render_types module itkwidgets.standalone module itkwidgets.standalone.config module itkwidgets.standalone_server module itkwidgets.viewer module itkwidgets.viewer_config module

J

JUPYTER (itkwidgets.integrations.environment.Env attribute)

JUPYTERLITE (itkwidgets.integrations.environment.Env attribute)

L

LABELIMAGE (itkwidgets.render_types.RenderType attribute)

loop (itkwidgets.viewer.Viewer property)

M

main() (in module itkwidgets.standalone_server) module itkwidgets itkwidgets._initialization_params itkwidgets._method_types itkwidgets._type_aliases itkwidgets.cell_watcher itkwidgets.imjoy itkwidgets.integrations itkwidgets.integrations.environment itkwidgets.integrations.imageio itkwidgets.integrations.itk itkwidgets.integrations.meshio itkwidgets.integrations.monai itkwidgets.integrations.numpy itkwidgets.integrations.pyimagej itkwidgets.integrations.pytorch itkwidgets.integrations.pyvista itkwidgets.integrations.skan itkwidgets.integrations.vedo itkwidgets.integrations.vtk itkwidgets.integrations.xarray itkwidgets.integrations.zarr itkwidgets.render_types itkwidgets.standalone itkwidgets.standalone.config itkwidgets.standalone_server itkwidgets.viewer itkwidgets.viewer_config

MUI_HREF (in module itkwidgets.viewer_config)

N

not_created (itkwidgets.cell_watcher.Viewers property)

O

on_ready() (itkwidgets.standalone_server.ViewerReady method)

P

parse_input_data() (in module itkwidgets._initialization_params) POINT_SET (itkwidgets.render_types.RenderType attribute)

PointSet (in module itkwidgets._type_aliases) post_run_cell() (itkwidgets.cell_watcher.CellWatcher method) PYDATA_SPHINX_HREF (in module itkwidgets.viewer_config)

Q

queue_request() (itkwidgets.viewer.Viewer method)

queue_worker() (itkwidgets.viewer.Viewer method)

R

read_files() (in module itkwidgets.standalone_server) ready_to_run_next_cell() (itkwidgets.cell_watcher.CellWatcher method) register_itkwasm_imjoy_codecs() (in module itkwidgets.imjoy)

register_itkwasm_imjoy_codecs_cli() (in module itkwidgets.imjoy) RenderType (class in itkwidgets.render_types) run() (itkwidgets.viewer.ViewerRPC method) run_queued_requests() (itkwidgets.viewer.Viewer method)

S

SAGEMAKER (itkwidgets.integrations.environment.Env attribute) select_layer() (itkwidgets.viewer.Viewer method) SERVER_HOST (in module itkwidgets.standalone.config) SERVER_PORT (in module itkwidgets.standalone.config) set_annotations_enabled() (itkwidgets.viewer.Viewer method) set_axes_enabled() (itkwidgets.viewer.Viewer method) set_background_color() (itkwidgets.viewer.Viewer method) set_cropping_planes() (itkwidgets.viewer.Viewer method) set_default_ui_values() (itkwidgets.viewer.ViewerRPC method) set_event() (itkwidgets.viewer.ViewerRPC method) set_image() (itkwidgets.viewer.Viewer method) set_image_blend_mode() (itkwidgets.viewer.Viewer method) set_image_color_map() (itkwidgets.viewer.Viewer method) set_image_color_range() (itkwidgets.viewer.Viewer method) set_image_color_range_bounds() (itkwidgets.viewer.Viewer method) set_image_component_visibility() (itkwidgets.viewer.Viewer method) set_image_gradient_opacity() (itkwidgets.viewer.Viewer method) set_image_gradient_opacity_scale() (itkwidgets.viewer.Viewer method) set_image_interpolation_enabled() (itkwidgets.viewer.Viewer method) set_image_piecewise_function_gaussians() (itkwidgets.viewer.Viewer method) set_image_shadow_enabled() (itkwidgets.viewer.Viewer method) set_image_volume_sample_distance() (itkwidgets.viewer.Viewer method)

set_image_volume_scattering_blend() (itkwidgets.viewer.Viewer method) set_label_image() (itkwidgets.viewer.Viewer method) set_label_image_blend() (itkwidgets.viewer.Viewer method) set_label_image_label_names() (itkwidgets.viewer.Viewer method) set_label_image_lookup_table() (itkwidgets.viewer.Viewer method) set_label_image_weights() (itkwidgets.viewer.Viewer method) set_label_or_image() (in module itkwidgets.standalone_server) set_layer_visibility() (itkwidgets.viewer.Viewer method) set_point_set() (itkwidgets.viewer.Viewer method) set_rendering_view_container_style() (itkwidgets.viewer.Viewer method) set_rotate() (itkwidgets.viewer.Viewer method) set_ui_collapsed() (itkwidgets.viewer.Viewer method) set_units() (itkwidgets.viewer.Viewer method) set_view_mode() (itkwidgets.viewer.Viewer method) set_x_slice() (itkwidgets.viewer.Viewer method) set_y_slice() (itkwidgets.viewer.Viewer method) set_z_slice() (itkwidgets.viewer.Viewer method) setup() (itkwidgets.cell_watcher.CellWatcher method) (itkwidgets.viewer.ViewerRPC method) standalone_viewer() (in module itkwidgets.standalone_server) start_viewer() (in module itkwidgets.standalone_server) Style (in module itkwidgets._type_aliases)

U

update_namespace() (itkwidgets.cell_watcher.CellWatcher method) update_screenshot() (itkwidgets.viewer.ViewerRPC method)

update_viewer_status() (itkwidgets.cell_watcher.CellWatcher method) (itkwidgets.cell_watcher.Viewers method) (itkwidgets.viewer.ViewerRPC method)

V

view() (in module itkwidgets.viewer) Viewer (class in itkwidgets.viewer) VIEWER (in module itkwidgets.standalone_server) VIEWER_HTML (in module itkwidgets.standalone.config) viewer_ready() (itkwidgets.cell_watcher.CellWatcher method) (itkwidgets.cell_watcher.Viewers method)

ViewerReady (class in itkwidgets.standalone_server) ViewerRPC (class in itkwidgets.viewer) Viewers (class in itkwidgets.cell_watcher) vmax (itkwidgets.viewer.Viewer property) vmin (itkwidgets.viewer.Viewer property) vtk_image_to_ngff_image() (in module itkwidgets.integrations.vtk) vtk_polydata_to_vtkjs() (in module itkwidgets.integrations.vtk)

W

wait() (itkwidgets.standalone_server.ViewerReady method)

X

xarray_data_array_to_numpy() (in module itkwidgets.integrations.xarray)

xarray_data_set_to_numpy() (in module itkwidgets.integrations.xarray)